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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829102.1_cds_XP_016503605.1_17134
CDS Infomation

[gene=LOC107821682] [db_xref=GeneID:107821682] [protein=2-oxoglutarate-dependent dioxygenase AOP3-like isoform X1] [protein_id=XP_016503605.1] [location=join(16785..17161,17728..18049,18134..18388)] [gbkey=CDS]
Sequence

ATGGGTTCTTTAACAGCTTCACCACAATTACTAGTAGTAGACTTCAATAATGAAGAACTA
AGGCCAGGCACAGCCACTTGGGAATTTACATGTAAAGATATCAGGTTTGCCTTTGAAAAC
CATGGCTGCTTTATAGCACTTTATGATAAAATCTCACCCCAACTTCAAAAATCCATTTTT
CAAGCTTCCCAACAGTTATTTGAGCTTCCTTTAGAGAAAAAAATTCTAAACACAAATGAA
AAACCCTACCATGGCTATGTTGGTCAAATTCCATTTCTACCTAATCATGAAGCCTTTGGT
ATTGACTATGCAACTACTTCTCAAGGTATTCAAAGCTTTTCCAACCTCATGTGGCCTCAA
GGAAACGACTTTTTTAGTGAGAATTCATTGACGTTTTCAAAGATTGTGGCGGAGTTGGAT
CAGAAAGTTGTAAGAATGCTATTTGAAAGCTATGGAATAGAGAAAAACTGTGAATCATAC
CTTGAATCAACCACGTATCTACTTCGATACCTGAAATATGACGCTCCAAATACAAAGGAA
AATAGTATGGTTTTCCCCCCACATACTGATAAAACATTCACGACCGTACTATATCAAAAT
CACATTTCAGGCTTGGAAATTCAAACTCGAGATGGACAATGGTTAACTCTGGATTTCCCA
CCTTCTTCTTTTGTAGTCATGGCGGGTGAAGCATTCAGAGGGTGGAGCAATGATCGCGTT
CTTACGCCTGTCCACAAGGTGATTATGGATATAAGTGGGAATGAAACAAGATACACTGTT
GGAATATTTACTTTTCTAAAGGATAATAAAATGATAGAAGTAGCAGAAGAACTAGTTGAT
GAAGAACATCCATTGCAGTTTCAGCCATTTGTTCATATAGATTTGATCAAGTTTTTTGAC
ACAGAACGTGGTCGGAGATCGCAGAATTTAGTCAAAGACTTTTGTGGTGTTTGA

Peptide Sequence

PEP ID

XP_016503605.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3-like isoform X1 [Nicotiana tabacum]
Sequence

MGSLTASPQLLVVDFNNEELRPGTATWEFTCKDIRFAFENHGCFIALYDKISPQLQKSIF
QASQQLFELPLEKKILNTNEKPYHGYVGQIPFLPNHEAFGIDYATTSQGIQSFSNLMWPQ
GNDFFSENSLTFSKIVAELDQKVVRMLFESYGIEKNCESYLESTTYLLRYLKYDAPNTKE
NSMVFPPHTDKTFTTVLYQNHISGLEIQTRDGQWLTLDFPPSSFVVMAGEAFRGWSNDRV
LTPVHKVIMDISGNETRYTVGIFTFLKDNKMIEVAEELVDEEHPLQFQPFVHIDLIKFFD
TERGRRSQNLVKDFCGV

Transcript Sequence

Gene sequence data has not been registered.